Yijie Wang
Yijie Wang
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Analysis and modeling of multivariate chaotic time series based on neural network
M Han, Y Wang
Expert Systems with Applications 36 (2), 1280-1290, 2009
Aptamer drug conjugates (ApDCs) of active metabolites of nucleoside analogues and cytotoxic agents inhibit pancreatic tumor cell growth
JJR Sorah Yoon, Kai-Wen Huang, Vikash Reebye, Duncan Spalding, Teresa M ...
Molecular Therapy: Nucleic Acid, 2016
AptaTRACE Elucidates RNA Sequence-Structure Motifs from Selection Trends in HT-SELEX Experiments
TMP Phuong Dao4 , Jan Hoinka4 , Mayumi Takahashi , Jiehua Zhou , Michelle Ho ...
Cell System 3, 62–70, 2016
Functional module identification in protein interaction networks by interaction patterns
Y Wang, X Qian
Bioinformatics 30 (1), 81-93, 2014
Defining and identifying cograph communities in complex networks
S Jia, LGY Gao, J Nastos, Y Wang
New J. Phys 17, 013044, 2015
Reprogramming of regulatory network using expression uncovers sex-specific gene regulation in Drosophila
Y Wang, DY Cho, H Lee, J Fear, B Oliver, TM Przytycka
Nature communications 9 (1), 4061, 2018
Diagnostic Evidence GAuge of Single cells (DEGAS): a flexible deep transfer learning framework for prioritizing cells in relation to disease
TS Johnson, CY Yu, Z Huang, S Xu, T Wang, C Dong, W Shao, MA Zaid, ...
Genome medicine 14 (1), 11, 2022
Subpopulation detection and their comparative analysis across single-cell experiments with scPopCorn
Y Wang, J Hoinka, TM Przytycka
Cell systems 8 (6), 506-513. e5, 2019
Joint clustering of protein interaction networks through Markov random walk
Y Wang, X Qian
BMC Systems Biology 8 (Suppl 1), S9, 2014
ParsVNN: parsimony visible neural networks for uncovering cancer-specific and drug-sensitive genes and pathways
X Huang, K Huang, T Johnson, M Radovich, J Zhang, J Ma, Y Wang
NAR genomics and bioinformatics 3 (4), lqab097, 2021
Finding low-conductance sets with dense interactions (FLCD) for better protein complex prediction
Y Wang, X Qian
Proceedings of the 7th ACM International Conference on Bioinformatics …, 2016
AptaBlocks: Designing RNA complexes and accelerating RNA-based drug delivery systems
Y Wang, J Hoinka, Y Liang, T Adamus, P Swiderski, TM Przytycka
Nucleic acids research 46 (16), 8133-8142, 2018
Fast projection onto the capped simplex with applications to sparse regression in bioinformatics
MS Ang, J Ma, N Liu, K Huang, Y Wang
Advances in Neural Information Processing Systems 34, 9990-9999, 2021
A novel subgradient-based optimization algorithm for blockmodel functional module identification
Y Wang, X Qian
BMC Bioinformatics 14 (Suppl 2), S23, 2013
Functional module identification by block modeling using simulated annealing with path relinking
YWX Qian
Proceedings of the ACM Conference on Bioinformatics, Computational Biology …, 2012
Co-segmentation of multiple images through random walk on graphs
Y Wang, BJ Yoon, X Qian
2016 IEEE International Conference on Acoustics, Speech and Signal …, 2016
Biological network clustering by robust NMF
Y Wang, X Qian
Proceedings of the 5th ACM Conference on Bioinformatics, Computational …, 2014
NetREX-CF integrates incomplete transcription factor data with gene expression to reconstruct gene regulatory networks
Y Wang, H Lee, JM Fear, I Berger, B Oliver, TM Przytycka
Communications Biology 5 (1), 1282, 2022
MobilePrune: Neural Network Compression via 0 Sparse Group Lasso on the Mobile System
Y Shao, K Zhao, Z Cao, Z Peng, X Peng, P Li, Y Wang, J Ma
Sensors 22 (11), 4081, 2022
ClusterM: a scalable algorithm for computational prediction of conserved protein complexes across multiple protein interaction networks
Y Wang, H Jeong, BJ Yoon, X Qian
BMC genomics 21, 1-14, 2020
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