Madalena Chaves
Madalena Chaves
INRIA Sophia Antipolis
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Robustness and fragility of Boolean models for genetic regulatory networks
M Chaves, R Albert, ED Sontag
Journal of theoretical biology 235 (3), 431-449, 2005
Methods of robustness analysis for Boolean models of gene control networks
M Chaves, ED Sontag, R Albert
IEE Proceedings-Systems Biology 153 (4), 154-167, 2006
Uncovering operational interactions in genetic networks using asynchronous Boolean dynamics
L Tournier, M Chaves
Journal of theoretical biology 260 (2), 196-209, 2009
Bistable biological systems: A characterization through local compact input-to-state stability
M Chaves, T Eissing, F Allgower
IEEE Transactions on Automatic Control 53 (Special Issue), 87-100, 2008
Methods for qualitative analysis of genetic networks
M Chaves
2009 European Control Conference (ECC), 671-676, 2009
State-estimators for chemical reaction networks of Feinberg-Horn-Jackson zero deficiency type
M Chaves, ED Sontag
arXiv preprint math/0012130, 2000
Shape, size, and robustness: feasible regions in the parameter space of biochemical networks
A Dayarian, M Chaves, ED Sontag, AM Sengupta
PLoS computational biology 5 (1), e1000256, 2009
Optimal length and signal amplification in weakly activated signal transduction cascades
M Chaves, ED Sontag, RJ Dinerstein
The Journal of Physical Chemistry B 108 (39), 15311-15320, 2004
Vehicle networks: Achieving regular formation
S Glavaski, M Chaves, R Day, P Nag, A Williams, W Zhang
American Control Conference, 2003. Proceedings of the 2003 5, 4095-4100 vol. 5, 2003
Exact control of genetic networks in a qualitative framework: the bistable switch example
M Chaves, JL Gouzé
Automatica 47 (6), 1105-1112, 2011
A theoretical exploration of birhythmicity in the p53-Mdm2 network
W Abou-Jaoudé, M Chaves, JL Gouzé
PLOS one 6 (2), e17075, 2011
Transcription-based circadian mechanism controls the duration of molecular clock states in response to signaling inputs
S Almeida, M Chaves, F Delaunay
Journal of theoretical biology 484, 110015, 2020
Input-to-state stability of rate-controlled biochemical networks
M Chaves
SIAM Journal on Control and Optimization 44 (2), 704-727, 2005
Multistability and oscillations in genetic control of metabolism
DA Oyarzún, M Chaves, M Hoff-Hoffmeyer-Zlotnik
Journal of theoretical biology 295, 139-153, 2012
Comparing Boolean and piecewise affine differential models for genetic networks
M Chaves, L Tournier, JL Gouzé
Acta biotheoretica 58 (2-3), 217-232, 2010
Geometry and topology of parameter space: investigating measures of robustness in regulatory networks
M Chaves, A Sengupta, ED Sontag
Journal of mathematical biology 59, 315-358, 2009
Steady-states of receptor–ligand dynamics: a theoretical framework
M Chaves, ED Sontag, RJ Dinerstein
Journal of theoretical biology 227 (3), 413-428, 2004
Design of a bistable switch to control cellular uptake
DA Oyarzún, M Chaves
Journal of The Royal Society Interface 12 (113), 20150618, 2015
Modeling and analysis of gene regulatory networks
G Bernot, JP Comet, A Richard, M Chaves, JL Gouzé, F Dayan
Modeling in computational biology and biomedicine: A multidisciplinary …, 2012
Hierarchy of models: From qualitative to quantitative analysis of circadian rhythms in cyanobacteria
M Chaves, M Preto
Chaos: An Interdisciplinary Journal of Nonlinear Science 23 (2), 2013
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