Alex Graudenzi

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Marco AntoniottiProfessor of Computer Science, Università degli Studi di Milano-BicoccaDirección de correo verificada de unimib.it
Giulio CaravagnaCancer Data Science Laboratory, University of TriesteDirección de correo verificada de units.it
Daniele RamazzottiDepartment of Medicine and Surgery, University of Milano-Bicocca, Milano, ItalyDirección de correo verificada de unimib.it
Giancarlo MauriProfessor emeritus of Computer Science - University of Milano-BicoccaDirección de correo verificada de unimib.it
Davide MasperoSingle Cell Genomics Team - Centre Nacional d’Anàlisi Genòmica (CNAG-CRG), Barcelona, SpainDirección de correo verificada de cnag.crg.eu
Chiara DamianiDepartment of Biotechnology and BiosciencesDirección de correo verificada de unimib.it
Marco VILLANIUniversity of Modena and Reggio EmiliaDirección de correo verificada de unimore.it
Roberto SERRAUniversità di Modena; European Centre for Living Technology, Venice; IAS, AmsterdamDirección de correo verificada de unimore.it
Fabrizio AngaroniHuman TechnopoleDirección de correo verificada de fht.org
Rocco PiazzaUniversity of Milano-BicoccaDirección de correo verificada de unimib.it
Bud MishraProfessor of Computer Science and MathematicsDirección de correo verificada de nyu.edu
Alessandro FilisettiCIO at Officinae Bio S.r.l.Dirección de correo verificada de officinae.bio
Luca De SanoUniversità degli Studi di Milano BicoccaDirección de correo verificada de campus.unimib.it
Annamaria ColacciUniversity of BolognaDirección de correo verificada de unibo.it
Loes Olde LoohuisAssistant professor at UCLADirección de correo verificada de mednet.ucla.edu
Marzia Di FilippoUniversity of Milano-BicoccaDirección de correo verificada de unimib.it
Isabella CastiglioniResearcher, IBFM CNRDirección de correo verificada de ibfm.cnr.it
Lucrezia PatrunoConputational Cancer Genomics research group, UCL Cancer InstituteDirección de correo verificada de campus.unimib.it
De Matteis GiovanniDepartment of Mathematics and Information Sciences, Northumbria University, NewcastleDirección de correo verificada de unipv.it
Dario PesciniDepartment of Statistics and Quantitative Methods - University of Milano-BicoccaDirección de correo verificada de unimib.it

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Alex Graudenzi

Dept. of Informatics, Systems and Communication, Univ. of Milan-Bicocca

Dirección de correo verificada de unimib.it - Página principal

Data Science AI Bioinformatics Cancer Evolution Complex Systems


Título Ordenar por citas Ordenar por año Ordenar por título	Citado por Citado por	Año
Why a simple model of genetic regulatory networks describes the distribution of avalanches in gene expression data R Serra, M Villani, A Graudenzi, SA Kauffman Journal of theoretical biology 246 (3), 449-460, 2007	162	2007
CAPRI: efficient inference of cancer progression models from cross-sectional data D Ramazzotti, G Caravagna, L Olde Loohuis, A Graudenzi, I Korsunsky, ... Bioinformatics 31 (18), 3016-3026, 2015	105	2015
Algorithmic methods to infer the evolutionary trajectories in cancer progression G Caravagna, A Graudenzi, D Ramazzotti, R Sanz-Pamplona, L De Sano, ... Proceedings of the National Academy of Sciences 113 (28), E4025-E4034, 2016	95	2016
Integration of single-cell RNA-seq data into population models to characterize cancer metabolism C Damiani, D Maspero, M Di Filippo, R Colombo, D Pescini, A Graudenzi, ... PLoS computational biology 15 (2), e1006733, 2019	92	2019
Inferring tree causal models of cancer progression with probability raising LO Loohuis, G Caravagna, A Graudenzi, D Ramazzotti, G Mauri, ... PloS one 9 (10), e108358, 2014	76	2014
Mutational signatures and heterogeneous host response revealed via large-scale characterization of SARS-CoV-2 genomic diversity A Graudenzi, D Maspero, F Angaroni, R Piazza, D Ramazzotti Iscience 24 (2), 2021	71	2021
Dynamical properties of a Boolean model of gene regulatory network with memory A Graudenzi, R Serra, M Villani, C Damiani, A Colacci, SA Kauffman Journal of Computational Biology 18 (10), 1291-1303, 2011	71	2011
A review of spatial computational models for multi-cellular systems, with regard to intestinal crypts and colorectal cancer development G De Matteis, A Graudenzi, M Antoniotti Journal of mathematical biology 66 (7), 1409-1462, 2013	62	2013
A review of computational strategies for denoising and imputation of single-cell transcriptomic data L Patruno, D Maspero, F Craighero, F Angaroni, M Antoniotti, A Graudenzi Briefings in bioinformatics 22 (4), bbaa222, 2021	55	2021
SpidermiR: an R/bioconductor package for integrative analysis with miRNA data C Cava, A Colaprico, G Bertoli, A Graudenzi, TC Silva, C Olsen, ... International journal of molecular sciences 18 (2), 274, 2017	52	2017
TRONCO: an R package for the inference of cancer progression models from heterogeneous genomic data L De Sano, G Caravagna, D Ramazzotti, A Graudenzi, G Mauri, B Mishra, ... Bioinformatics 32 (12), 1911-1913, 2016	48	2016
A stochastic model of the emergence of autocatalytic cycles A Filisetti, A Graudenzi, R Serra, M Villani, D De Lucrezia, RM Füchslin, ... Journal of Systems Chemistry 2, 1-10, 2011	47	2011
Robustness analysis of a Boolean model of gene regulatory network with memory A Graudenzi, R Serra, M Villani, A Colacci, SA Kauffman Journal of Computational Biology 18 (4), 559-577, 2011	42	2011
Learning mutational graphs of individual tumour evolution from single-cell and multi-region sequencing data D Ramazzotti, A Graudenzi, L De Sano, M Antoniotti, G Caravagna BMC bioinformatics 20, 1-13, 2019	39	2019
Yellow nails, lymphedema and pleural effusion: treatment of chronic pleural effusion with pleuroperitoneal shunting JD Brofman, JB Hall, W Scott, AG Little Chest 97 (3), 743-745, 1990	38	1990
A stochastic model of autocatalytic reaction networks A Filisetti, A Graudenzi, R Serra, M Villani, RM Füchslin, N Packard, ... Theory in biosciences 131, 85-93, 2012	37	2012
Integration of transcriptomic data and metabolic networks in cancer samples reveals highly significant prognostic power A Graudenzi, D Maspero, M Di Filippo, M Gnugnoli, C Isella, G Mauri, ... Journal of biomedical informatics 87, 37-49, 2018	32	2018
The diffusion of perturbations in a model of coupled random boolean networks R Serra, M Villani, C Damiani, A Graudenzi, A Colacci Cellular Automata: 8th International Conference on Cellular Aotomata for …, 2008	30	2008
Growth and division in a dynamic protocell model M Villani, A Filisetti, A Graudenzi, C Damiani, T Carletti, R Serra Life 4 (4), 837-864, 2014	29	2014
VERSO: a comprehensive framework for the inference of robust phylogenies and the quantification of intra-host genomic diversity of viral samples D Ramazzotti, F Angaroni, D Maspero, C Gambacorti-Passerini, ... Patterns 2 (3), 2021	27	2021

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