Shahin Mohammadi

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Manolis KellisProfessor of Computer Science, MIT and Broad InstituteDirección de correo verificada de mit.edu
Jose Davila-VelderrainHuman TechnopoleDirección de correo verificada de fht.org
Hansruedi MathysUniversity of PittsburghDirección de correo verificada de pitt.edu
David GleichPurdue UniversityDirección de correo verificada de purdue.edu
Giorgos KolliasIBM T.J. Watson Research CenterDirección de correo verificada de us.ibm.com
Abbas Nowzari-Daliniassociate prof., university of tehranDirección de correo verificada de ut.ac.ir
Shankar SubramaniamUniversity of California San DiegoDirección de correo verificada de ucsd.edu
Hyeseung LeePicower Institute for Learning and Memory, Massachusetts Institute of TechnologyDirección de correo verificada de mit.edu
Robbie FensterMcLean HospitalDirección de correo verificada de partners.org
Sahar AsadiDirector of AI Labs at King, Microsoft GamingDirección de correo verificada de king.com
Ali Masoudi-Nejad, ProfessorLaboratory of Systems Biology and Bioinformatics (LBB), University of TehranDirección de correo verificada de ut.ac.ir
Falk SchreiberProfessor, University of Konstanz and Monash UniversityDirección de correo verificada de uni-konstanz.de
elahe elahiUniversity of TehranDirección de correo verificada de ut.ac.ir
J. Christopher LoveProfessor of Chemical Engineering, MITDirección de correo verificada de mit.edu
Brittany A GoodsAssistant Professor @ Dartmouth CollegeDirección de correo verificada de dartmouth.edu
Alex K. ShalekMIT, Ragon Institute, Broad InstituteDirección de correo verificada de mit.edu
Vikram RavindraUniversity of CincinnatiDirección de correo verificada de ucmail.uc.edu
Francisco J GarciaMassachusetts Institute of TechnologyDirección de correo verificada de mit.edu
Tamara G. KoldaMathSci.ai (independent consulting)Dirección de correo verificada de mathsci.ai
Huda NassarPostdoc, Stanford UniversityDirección de correo verificada de stanford.edu

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Shahin Mohammadi

Broad Institute

Dirección de correo verificada de broadinstitute.org - Página principal

Computational biology


Título Ordenar por citas Ordenar por año Ordenar por título	Citado por Citado por	Año
Single-cell transcriptomic analysis of Alzheimer’s disease H Mathys, J Davila-Velderrain, Z Peng, F Gao, S Mohammadi, JZ Young, ... Nature 570 (7761), 332-337, 2019	2033	2019
Kavosh: a new algorithm for finding network motifs ZRM Kashani, H Ahrabian, E Elahi, A Nowzari-Dalini, ES Ansari, S Asadi, ... BMC bioinformatics 10, 1-12, 2009	299	2009
Single-cell transcriptomic atlas of the human retina identifies cell types associated with age-related macular degeneration M Menon, S Mohammadi, J Davila-Velderrain, BA Goods, TD Cadwell, ... Nature communications 10 (1), 4902, 2019	261	2019
Cell type-specific transcriptomics reveals that mutant huntingtin leads to mitochondrial RNA release and neuronal innate immune activation H Lee, RJ Fenster, SS Pineda, WS Gibbs, S Mohammadi, ... Neuron 107 (5), 891-908. e8, 2020	191	2020
Network similarity decomposition (nsd): A fast and scalable approach to network alignment G Kollias, S Mohammadi, A Grama IEEE Transactions on Knowledge and Data Engineering 24 (12), 2232-2243, 2011	111	2011
Scope and limitations of yeast as a model organism for studying human tissue-specific pathways S Mohammadi, B Saberidokht, S Subramaniam, A Grama BMC systems biology 9, 1-22, 2015	99	2015
A Critical Survey of Deconvolution Methods for Separating Cell-Types in Complex Tissues S Mohammadi, N Zuckerman, A Goldsmith, A Grama Proceedings of IEEE, Special Issue on Principles and Applications of Science …, 2016	84	2016
Reconstruction of cell-type-specific interactomes at single-cell resolution S Mohammadi, J Davila-Velderrain, M Kellis Cell systems 9 (6), 559-568. e4, 2019	65	2019
Single-cell dissection of schizophrenia reveals neurodevelopmental-synaptic axis and transcriptional resilience WB Ruzicka, S Mohammadi, J Davila-Velderrain, S Subburaju, DR Tso, ... MedRxiv, 2020.11. 06.20225342, 2020	62	2020
Low rank spectral network alignment H Nassar, N Veldt, S Mohammadi, A Grama, DF Gleich Proceedings of the 2018 World Wide Web Conference, 619-628, 2018	56	2018
A geometric approach to characterize the functional identity of single cells S Mohammadi, V Ravindra, DF Gleich, A Grama Nature communications 9 (1), 1516, 2018	56	2018
Triangular Alignment (TAME): A Tensor-based Approach for Higher-order Network Alignment S Mohammadi, DF Gleich, TG Kolda, A Grama IEEE/ACM Transactions on Computational Biology and Bioinformatics, 1-1, 2016	56	2016
A multiresolution framework to characterize single-cell state landscapes S Mohammadi, J Davila-Velderrain, M Kellis Nature communications 11 (1), 5399, 2020	52	2020
Single-cell multi-cohort dissection of the schizophrenia transcriptome WB Ruzicka, S Mohammadi, JF Fullard, J Davila-Velderrain, S Subburaju, ... Science 384 (6698), eadg5136, 2024	35	2024
Author Correction: Single-cell transcriptomic analysis of Alzheimer’s disease H Mathys, J Davila-Velderrain, Z Peng, F Gao, S Mohammadi, JZ Young, ... Nature 571 (7763), E1-E1, 2019	35	2019
Single-cell profiling of the human primary motor cortex in ALS and FTLD SS Pineda, H Lee, BE Fitzwalter, S Mohammadi, LJ Pregent, ... biorxiv, 2021.07. 07.451374, 2021	32	2021
A fast approach to global alignment of protein-protein interaction networks G Kollias, M Sathe, S Mohammadi, A Grama BMC research notes 6, 1-11, 2013	29	2013
Context-specific recommendation system for predicting similar pubmed articles S Mohammadi, S Kylasa, G Kollias, A Grama 2016 IEEE 16th International Conference on Data Mining Workshops (ICDMW …, 2016	19	2016
Single-cell anatomical analysis of human hippocampus and entorhinal cortex uncovers early-stage molecular pathology in Alzheimer’s disease J Davila-Velderrain, H Mathys, S Mohammadi, B Ruzicka, X Jiang, A Ng, ... bioRxiv, 2021.07. 01.450715, 2021	15	2021
Single-cell deconvolution of 3,000 post-mortem brain samples for eQTL and GWAS dissection in mental disorders Y Park, L He, J Davila-Velderrain, L Hou, S Mohammadi, H Mathys, ... BioRxiv, 2021.01. 21.426000, 2021	14	2021

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