SIMLR: A tool for large‐scale genomic analyses by multi‐kernel learning B Wang, D Ramazzotti, L De Sano, J Zhu, E Pierson, S Batzoglou Proteomics 18 (2), 1700232, 2018 | 108* | 2018 |
Algorithmic methods to infer the evolutionary trajectories in cancer progression G Caravagna, A Graudenzi, D Ramazzotti, R Sanz-Pamplona, L De Sano, ... Proceedings of the National Academy of Sciences 113 (28), E4025-E4034, 2016 | 93 | 2016 |
TRONCO: an R package for the inference of cancer progression models from heterogeneous genomic data L De Sano, G Caravagna, D Ramazzotti, A Graudenzi, G Mauri, B Mishra, ... Bioinformatics 32 (12), 1911-1913, 2016 | 47 | 2016 |
OncoScore: a novel, Internet-based tool to assess the oncogenic potential of genes R Piazza, D Ramazzotti, R Spinelli, A Pirola, L De Sano, P Ferrari, ... Scientific reports 7 (1), 46290, 2017 | 43 | 2017 |
Learning mutational graphs of individual tumour evolution from single-cell and multi-region sequencing data D Ramazzotti, A Graudenzi, L De Sano, M Antoniotti, G Caravagna BMC bioinformatics 20, 1-13, 2019 | 39 | 2019 |
Design of the tronco bioconductor package for translational oncology M Antoniotti, G Caravagna, L De Sano, A Graudenzi, G Mauri, B Mishra, ... bioRxiv, 027524, 2015 | 8 | 2015 |
Evolutionary signatures of human cancers revealed via genomic analysis of over 35,000 patients D Fontana, I Crespiatico, V Crippa, F Malighetti, M Villa, F Angaroni, ... Nature Communications 14 (1), 5982, 2023 | 4 | 2023 |
Oncoscore, a Novel, internet-based tool to assess the oncogenic potential of genes can differentiate Between CP-CML and BC-CML associated genes, and between CP-CML patients … R Piazza, L Mologni, D Ramazzotti, R Spinelli, A Pirola, L De Sano, ... Blood 128 (22), 3075, 2016 | 2 | 2016 |
Automatising the analysis of stochastic biochemical time-series G Caravagna, L De Sano, M Antoniotti BMC bioinformatics 16, 1-7, 2015 | 2 | 2015 |
cyTRON and cyTRON/JS: Two Cytoscape-Based Applications for the Inference of Cancer Evolution Models L Patruno, E Galimberti, D Ramazzotti, G Caravagna, L De Sano, ... Computational Intelligence Methods for Bioinformatics and Biostatistics …, 2020 | | 2020 |
cyTRON and cyTRON/JS: two Cytoscape-based applications for the inference of cancer evolution models L Patruno, E Galimberti, D Ramazzotti, G Caravagna, L De Sano, ... arXiv preprint arXiv:1705.03067, 2017 | | 2017 |
OncoScore: an R package to measure the oncogenic potential of genes D Ramazzotti, L De Sano, R Spinelli, R Piazza, CG Passerini arXiv preprint arXiv:1705.03067, 2017 | | 2017 |
Implementation of the TRONCO package for TRanslational ONCOlogy M Antoniotti, G Caravagna, L De Sano, A Graudenzi, G Mauri, B Mishra, ... bioRxiv, 027524, 2015 | | 2015 |
Cytoscape-Based Applications for the Inference of Cancer Evolution Models G Caravagna, L De Sano, M Antoniotti, A Graudenzi | | |