Yuliya Karpievitch
Yuliya Karpievitch
AI & Data Analyst, Biostatistician
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Citado por
Normalization and missing value imputation for label-free LC-MS analysis
YV Karpievitch, AR Dabney, RD Smith
BMC bioinformatics 13, 1-9, 2012
Liquid chromatography mass spectrometry-based proteomics: biological and technological aspects
YV Karpievitch, AD Polpitiya, GA Anderson, RD Smith, AR Dabney
The annals of applied statistics 4 (4), 1797, 2010
A statistical framework for protein quantitation in bottom-up MS-based proteomics
Y Karpievitch, J Stanley, T Taverner, J Huang, JN Adkins, C Ansong, ...
Bioinformatics 25 (16), 2028-2034, 2009
Population scale mapping of transposable element diversity reveals links to gene regulation and epigenomic variation
T Stuart, SR Eichten, J Cahn, YV Karpievitch, JO Borevitz, R Lister
elife 5, e20777, 2016
Extensive transcriptomic and epigenomic remodelling occurs during Arabidopsis thaliana germination
R Narsai, Q Gouil, D Secco, A Srivastava, YV Karpievitch, LC Liew, ...
Genome biology 18, 1-18, 2017
DanteR: an extensible R-based tool for quantitative analysis of-omics data
T Taverner, YV Karpievitch, AD Polpitiya, JN Brown, AR Dabney, ...
Bioinformatics 28 (18), 2404-2406, 2012
Label-free quantitative LC–MS proteomics of Alzheimer’s disease and normally aged human brains
VP Andreev, VA Petyuk, HM Brewer, YV Karpievitch, F Xie, J Clarke, ...
Journal of proteome research 11 (6), 3053-3067, 2012
Metabolomics data normalization with EigenMS
YV Karpievitch, SB Nikolic, R Wilson, JE Sharman, LM Edwards
PloS one 9 (12), e116221, 2014
Normalization of peak intensities in bottom-up MS-based proteomics using singular value decomposition
YV Karpievitch, T Taverner, JN Adkins, SJ Callister, GA Anderson, ...
Bioinformatics 25 (19), 2573-2580, 2009
An introspective comparison of random forest-based classifiers for the analysis of cluster-correlated data by way of RF++
YV Karpievitch, EG Hill, AP Leclerc, AR Dabney, JS Almeida
PloS one 4 (9), e7087, 2009
Short-and long-term benefits for forest biodiversity of retaining unlogged patches in harvested areas
SC Baker, CB Halpern, TJ Wardlaw, RL Crawford, RE Bigley, GJ Edgar, ...
Forest Ecology and Management 353, 187-195, 2015
Aspergillus Infections and Progression of Structural Lung Disease in Children with Cystic Fibrosis
O Breuer, A Schultz, LW Garratt, L Turkovic, T Rosenow, CP Murray, ...
American journal of respiratory and critical care medicine 201 (6), 688-696, 2020
A statistical method for assessing peptide identification confidence in accurate mass and time tag proteomics
JR Stanley, JN Adkins, GW Slysz, ME Monroe, SO Purvine, ...
Analytical chemistry 83 (16), 6135-6140, 2011
PrepMS: TOF MS data graphical preprocessing tool
YV Karpievitch, EG Hill, AJ Smolka, JS Morris, KR Coombes, KA Baggerly, ...
Bioinformatics 23 (2), 264-265, 2007
HOME: a histogram based machine learning approach for effective identification of differentially methylated regions
A Srivastava, YV Karpievitch, SR Eichten, JO Borevitz, R Lister
BMC bioinformatics 20, 1-15, 2019
Evaluating abundance trends of iconic species using local ecological knowledge
C Peñaherrera-Palma, I van Putten, YV Karpievitch, S Frusher, ...
Biological Conservation 225, 197-207, 2018
Novel elements of the chondrocyte stress response identified using an in vitro model of mouse cartilage degradation
R Wilson, SB Golub, L Rowley, C Angelucci, YV Karpievitch, JF Bateman, ...
Journal of proteome research 15 (3), 1033-1050, 2016
Aberrant cell migration contributes to defective airway epithelial repair in childhood wheeze
T Iosifidis, EN Sutanto, AG Buckley, L Coleman, EE Gill, AH Lee, KM Ling, ...
JCI insight 5 (7), 2020
Ivacaftor and airway inflammation in preschool children with cystic fibrosis
P McNally, D Butler, YV Karpievitch, B Linnane, S Ranganathan, SM Stick, ...
American Journal of Respiratory and Critical Care Medicine 204 (5), 605-608, 2021
mGrid: A load-balanced distributed computing environment for the remote execution of the user-defined Matlab code
YV Karpievitch, JS Almeida
BMC bioinformatics 7, 1-12, 2006
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Artículos 1–20